Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs10147337 chr14:95025560 A/T 1.97E-6 277 22.27 33.92 22.57 KM Plot
KIRP rs10170109 chr2:100923641 G/C 0.000148 285 27.43 25.67 25.15 KM Plot
KIRP rs10174145 chr2:100932488 T/C 2.03E-5 283 26 26 25.57 KM Plot
KIRP rs10181411 chr2:47139019 T/C 2.19E-7 289 25.37 34.43 10.97 KM Plot
KIRP rs10182399 chr2:100932582 G/C 2.03E-5 283 26 26 25.57 KM Plot
KIRP rs10183150 chr2:100939117 A/G 0.000175 287 22.8 26 26.37 KM Plot
KIRP rs10186134 chr2:100939501 T/A 0.000125 283 22.22 26.2 25.55 KM Plot
KIRP rs10186736 chr2:162064364 G/T 1.92E-12 289 26.37 21.95 8.47 KM Plot
KIRP rs10194210 chr2:100923456 C/T 0.000172 285 26.92 25.7 25.15 KM Plot
KIRP rs10195793 chr2:100925803 A/G 9.23E-5 284 27.43 25.7 25.15 KM Plot
KIRP rs10199518 chr2:100946041 G/A 0.000178 287 22.8 26.2 25.5 KM Plot
KIRP rs10202326 chr2:100950237 A/G 1.92E-5 289 23.32 25.97 25.5 KM Plot
KIRP rs10205470 chr2:162045074 G/A 1.95E-12 289 26.37 21.97 8.47 KM Plot
KIRP rs10205916 chr2:1558451 A/T 2.14E-5 289 11.43 26.83 25.7 KM Plot
KIRP rs10211297 chr2:180335797 G/A 1.33E-11 288 23.97 41.33 8.6 KM Plot